https://pic.armedcats.net/2008/02/04/RotoyRX3.jpg
That tiny ass little picture of a photo-chopped Protege with RX-3 front end has made me want to make one.
Start with this:
https://pic.armedcats.net/2008/02/04/99532003MazdaProtege.jpg
Give it some RX-3 style touches, I'd start by tweaking the headlights so they appeared more like a dual lamp design. The grill would be made a bit larger as well and brushed aluminum egg-crate style.
While the front end work is being done, the floor would be cut up and a 13B-REW with a bridge port, custom short runner intake manifold/possibly ITB ceramic coated, 3mm apex seals, aluminum side/intermediate housings from Racing Beat (these shave 30lbs from the engine), ECU would likely be a Bosch Motorsports unit or find out what mazda uses for its' race cars as most off the shelf aftermarket EMS don't hold a candle to 15 year old GM units. All rotors and housings would be ceramic coated (with the same process Mazda used on it's R26b race engine).
Turbo setup would be either a stock hybrid, or a fully custom built sequential system based around GT28rs turbos. Intercoolers would be
Laminova units integrated into the manifolds plenum. The Exhaust header would be fully ceramic coated inside and out and heat wrapped (a bit overkill but rotaries have a lot of heat). I'd make an attempt to keep the engine as ecofriendly as it could be so if cats can be fitted without killing performance (or frying themselves) I'd go for it.
Transmission would be a 6 speed automatic mounted at the rear with the electronics heavily worked to improve shift response and allow FULL manual control. If I decided against this route, then I'd go with a proper 6 speed manual with a lever on the shifter to actuate the hydraulic clutch (I could use either the pedal or lever).
The suspension and brakes would likely be yanked, in it's entirety, from the RX-8. The exception being the rear-end and axles. Everything would be beefed up as needed and tweaked. Stainless braided lines, DOT5 brake fluid, and a large amount of rubber would finish the job.
Doors, hood, trunklid, and possibly the roof would be cut out, would be replaced with carbon fiber pieces (fully painted of course). Undercarriage would receive some shade tree aerodynamic improvements as well. The chassis structure itself would receive quite a bit of stiffening at the expense of a spare chassis. It may not get a cage, but it would hopefully be just about as strong!
The interior would follow more recent Mazda designs but using better quality materials, and a some what cleaner center console as I'm not a fan of a lot of buttons in a car.
When all is said and done, it would have to appear that it's something Mazda would have made, with just some in-expensive modifications added for better drivability.